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Publications

8 Aug 2019
H Hovhannisyan, A Hafez, C Llorens, T Gabaldón, CROSSMAPPER: estimating cross-mapping rates and optimizing experimental design in multi-species sequencing studies, Bioinformatics, , btz626, https://doi.org/10.1093/bioinformatics/btz626
15 Jun 2019
Pérez-Hansen, A., Lass-Flörl, C., Lackner, M., Aigner, M., Alastruey-Izquierdo, A., Arikan-Akdagli, S., ... & Cornely, O. A. (2019). Antifungal susceptibility profiles of rare ascomycetous yeasts. Journal of Antimicrobial Chemotherapy.
3 Jun 2019
Stavrou, A. A., Lackner, M., Lass-Flörl, C., & Boekhout, T. (2019). The changing spectrum of Saccharomycotina yeasts causing candidemia: phylogeny mirrors antifungal susceptibility patterns for azole drugs and amphothericin B. FEMS yeast research, 19(4), foz037.
3 Jun 2019
OPATHY Consortium, T. Gabaldon (2019). Recent trends in molecular diagnostics of yeast infections: from PCR to NGS. FEMS microbiology reviews.
1 Apr 2019
Arastehfar, A., Daneshnia, F., Zomorodian, K., Najafzadeh, M. J., Khodavaisy, S., Zarrinfar, H., ... & Salehi, M. (2019). Low Level of Antifungal Resistance in Iranian Isolates of Candida glabrata Recovered from Blood Samples in a Multicenter Study from 2015 to 2018 and Potential Prognostic Values of Genotyping and Sequencing of PDR1. Antimicrobial agents and chemotherapy, 63(7), e025
12 Dec 2018
Arastehfar, A., Fang, W., Daneshnia, F., Al-Hatmi, A. M., Liao, W., Pan, W., ... & Lass-Flörl, C. (2018). Novel multiplex real-time quantitative PCR detecting system approach for direct detection of Candida auris and its relatives in spiked serum samples. Future microbiology, 14(1), 33-45.
25 Sep 2018
Arastehfar, A., Fang, W., Pan, W., Liao, W., Yan, L., & Boekhout, T. (2018). Identification of nine cryptic species of Candida albicans, C. glabrata, and C. parapsilosis complexes using one-step multiplex PCR. BMC infectious diseases, 18(1), 480.
15 Feb 2019
Arastehfar, A., Daneshnia, F., Kord, M., Roudbary, M., Zarrinfar, H., Fang, W., ... & Liao, W. (2019). Comparison of 21-Plex PCR and API 20C AUX, MALDI-TOF MS, and rDNA sequencing for a wide range of clinically isolated yeast species: Improved identification by combining 21-Plex PCR and API 20C AUX as an alternative strategy for developing countries. Frontiers in cellular and infection microbiology, 9, 21.
2 Feb 2019
Arastehfar, A., Fang, W., Pan, W., Lackner, M., Liao, W., Badiee, P., ... & Boekhout, T. (2019). YEAST PANEL multiplex PCR for identification of clinically important yeast species: stepwise diagnostic strategy, useful for developing countries. Diagnostic microbiology and infectious disease, 93(2), 112-119.
24 Oct 2017
Vaezi, A., Fakhim, H., Arastehfar, A., Shokohi, T., Hedayati, M. T., Khodavaisy, S., ... & Dannaoui, E. (2018). In vitro antifungal activity of amphotericin B and 11 comparators against Aspergillus terreus species complex. Mycoses, 61(2), 134-142.

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